advanceDislocations(const double dt) | LSMDD::DislocationDynamicsModule | [virtual] |
ASCII enum value | LSMDD::DislocationDynamicsModule | |
BINARY enum value | LSMDD::DislocationDynamicsModule | |
computeDislocationLineField(const int line_handle, const int phi_handle, const int psi_handle) | LSMDD::DislocationDynamicsModule | [protected, virtual] |
computeNextDt() | LSMDD::DislocationDynamicsModule | [virtual] |
computeStableDt() | LSMDD::DislocationDynamicsModule | [inline, virtual] |
computeStableDtOnPatch(Patch< 3 > &patch, LevelSetFunctionIntegrator< 3 > *lsm_integrator, LevelSetMethodVelocityFieldStrategy< 3 > *lsm_velocity_field_strategy) | LSMDD::DislocationDynamicsModule | [virtual] |
computeUnitTangentVectorForDislocationLine(const int tangent_vector_handle, const int line_handle, const int phi_handle, const int psi_handle) | LSMDD::DislocationDynamicsModule | [protected, virtual] |
computeVelocityField(const double time, const int phi_handle, const int psi_handle, const int line_handle) | LSMDD::DislocationDynamicsModule | [virtual] |
d_aux_stress_field_handle | LSMDD::DislocationDynamicsModule | [protected] |
d_burgers_vectors | LSMDD::DislocationDynamicsModule | [protected] |
d_current_time | LSMDD::DislocationDynamicsModule | [protected] |
d_dislocation_line_field_handle | LSMDD::DislocationDynamicsModule | [protected] |
d_distance_handle | LSMDD::DislocationDynamicsModule | [protected] |
d_elastic_stress_strategy | LSMDD::DislocationDynamicsModule | [protected] |
d_end_time | LSMDD::DislocationDynamicsModule | [protected] |
d_force_handle | LSMDD::DislocationDynamicsModule | [protected] |
d_force_interp_fill_bdry_alg | LSMDD::DislocationDynamicsModule | [protected] |
d_force_interp_fill_bdry_sched | LSMDD::DislocationDynamicsModule | [protected] |
d_grad_phi_central_handle | LSMDD::DislocationDynamicsModule | [protected] |
d_grad_phi_minus_handle | LSMDD::DislocationDynamicsModule | [protected] |
d_grad_phi_plus_handle | LSMDD::DislocationDynamicsModule | [protected] |
d_grad_psi_central_handle | LSMDD::DislocationDynamicsModule | [protected] |
d_grad_psi_minus_handle | LSMDD::DislocationDynamicsModule | [protected] |
d_grad_psi_plus_handle | LSMDD::DislocationDynamicsModule | [protected] |
d_grid_geometry | LSMDD::DislocationDynamicsModule | [protected] |
d_hierarchy_configuration_needs_reset | LSMDD::DislocationDynamicsModule | [protected] |
d_last_stress_update_time | LSMDD::DislocationDynamicsModule | [protected] |
d_level_set_fcn_bc_module | LSMDD::DislocationDynamicsModule | [protected] |
d_level_set_fcn_fill_bdry_alg | LSMDD::DislocationDynamicsModule | [protected] |
d_level_set_fcn_fill_bdry_sched | LSMDD::DislocationDynamicsModule | [protected] |
d_level_set_fcn_scratch_ghostcell_width | LSMDD::DislocationDynamicsModule | [protected] |
d_lower_bc_phi | LSMDD::DislocationDynamicsModule | [protected] |
d_lower_bc_psi | LSMDD::DislocationDynamicsModule | [protected] |
d_lower_bc_velocity | LSMDD::DislocationDynamicsModule | [protected] |
d_lsm_algorithm | LSMDD::DislocationDynamicsModule | [protected] |
d_lsm_phi_field_extension_alg | LSMDD::DislocationDynamicsModule | [protected] |
d_lsm_psi_field_extension_alg | LSMDD::DislocationDynamicsModule | [protected] |
d_lsmdd_params | LSMDD::DislocationDynamicsModule | [protected] |
d_lsmdd_physics_strategy | LSMDD::DislocationDynamicsModule | [protected] |
d_num_dislocation_lines | LSMDD::DislocationDynamicsModule | [protected] |
d_num_simulation_steps_taken | LSMDD::DislocationDynamicsModule | [protected] |
d_num_stabilization_iterations | LSMDD::DislocationDynamicsModule | [protected] |
d_orthogonalization_interval | LSMDD::DislocationDynamicsModule | [protected] |
d_patch_hierarchy | LSMDD::DislocationDynamicsModule | [protected] |
d_phi_scratch_handle | LSMDD::DislocationDynamicsModule | [protected] |
d_psi_scratch_handle | LSMDD::DislocationDynamicsModule | [protected] |
d_reinitialization_interval | LSMDD::DislocationDynamicsModule | [protected] |
d_spatial_derivative_order | LSMDD::DislocationDynamicsModule | [protected] |
d_spatial_derivative_type | LSMDD::DislocationDynamicsModule | [protected] |
d_start_time | LSMDD::DislocationDynamicsModule | [protected] |
d_tangent_fill_bdry_alg | LSMDD::DislocationDynamicsModule | [protected] |
d_tangent_fill_bdry_sched | LSMDD::DislocationDynamicsModule | [protected] |
d_tangent_vector_handles | LSMDD::DislocationDynamicsModule | [protected] |
d_tangent_vectors | LSMDD::DislocationDynamicsModule | [protected] |
d_upper_bc_phi | LSMDD::DislocationDynamicsModule | [protected] |
d_upper_bc_psi | LSMDD::DislocationDynamicsModule | [protected] |
d_upper_bc_velocity | LSMDD::DislocationDynamicsModule | [protected] |
d_upwind_spatial_derivative_flag | LSMDD::DislocationDynamicsModule | [protected] |
d_use_orthogonalization | LSMDD::DislocationDynamicsModule | [protected] |
d_use_persistent_velocity_data | LSMDD::DislocationDynamicsModule | [protected] |
d_use_reinitialization | LSMDD::DislocationDynamicsModule | [protected] |
d_velocity_data_allocated | LSMDD::DislocationDynamicsModule | [protected] |
d_velocity_handle | LSMDD::DislocationDynamicsModule | [protected] |
DislocationDynamicsModule(Pointer< Database > input_db, Pointer< PatchHierarchy< 3 > > patch_hierarchy, ElasticStressStrategy *elastic_stress_strategy, LSMDD_PhysicsStrategy *lsmdd_physics_strategy) | LSMDD::DislocationDynamicsModule | |
endTimeReached() const | LSMDD::DislocationDynamicsModule | [virtual] |
fillGhostCellsForLevelSetFunctions(const int line_handle, const int phi_handle, const int psi_handle) | LSMDD::DislocationDynamicsModule | [protected, virtual] |
getControlVolumePatchDataHandle() const | LSMDD::DislocationDynamicsModule | [virtual] |
getCurrentTime() const | LSMDD::DislocationDynamicsModule | [virtual] |
getEndTime() const | LSMDD::DislocationDynamicsModule | [virtual] |
getExternalVelocityFieldPatchDataHandle(int component) const | LSMDD::DislocationDynamicsModule | [inline, virtual] |
getFromInput(Pointer< Database > input_db) | LSMDD::DislocationDynamicsModule | [protected, virtual] |
getNormalVelocityFieldPatchDataHandle(LEVEL_SET_FCN_TYPE level_set_fcn, int component) const | LSMDD::DislocationDynamicsModule | [inline, virtual] |
getPhiPatchDataHandle() const | LSMDD::DislocationDynamicsModule | [virtual] |
getPsiPatchDataHandle() const | LSMDD::DislocationDynamicsModule | [virtual] |
getStartTime() const | LSMDD::DislocationDynamicsModule | [virtual] |
getVelocityPatchDataHandle() const | LSMDD::DislocationDynamicsModule | [virtual] |
initializeCommunicationObjects() | LSMDD::DislocationDynamicsModule | [protected, virtual] |
initializeDislocationLevelSetFunctions() | LSMDD::DislocationDynamicsModule | [virtual] |
initializeLevelData(const Pointer< PatchHierarchy< 3 > > hierarchy, const int level_number, const double init_data_time, const int phi_handle, const int psi_handle, const bool can_be_refined, const bool initial_time, const Pointer< PatchLevel< 3 > > old_level=Pointer< PatchLevel< 3 > >((0)), const bool allocate_data=true) | LSMDD::DislocationDynamicsModule | [inline, virtual] |
initializeLevelSetFunctionsOnPatch(Patch< 3 > &patch, const double time, const int phi_handle, const int psi_handle) | LSMDD::DislocationDynamicsModule | [virtual] |
initializeVariables() | LSMDD::DislocationDynamicsModule | [protected, virtual] |
numSimulationStepsTaken() const | LSMDD::DislocationDynamicsModule | [virtual] |
printClassData(ostream &os) const | LSMDD::DislocationDynamicsModule | [virtual] |
providesExternalVelocityField() const | LSMDD::DislocationDynamicsModule | [inline, virtual] |
providesNormalVelocityField() const | LSMDD::DislocationDynamicsModule | [inline, virtual] |
resetHierarchyConfiguration(Pointer< PatchHierarchy< 3 > > hierarchy, const int coarsest_level, const int finest_level) | LSMDD::DislocationDynamicsModule | [virtual] |
s_lsmdd_binary_output_max_num_dislocations | LSMDD::DislocationDynamicsModule | [protected, static] |
s_lsmdd_version | LSMDD::DislocationDynamicsModule | [protected, static] |
setCurrentTime(const double time) | LSMDD::DislocationDynamicsModule | [inline, virtual] |
setLevelSetFunctionBoundaryConditions(Patch< 3 > &patch, const double fill_time, const int phi_handle, const int psi_handle, const IntVector< 3 > &ghost_width_to_fill) | LSMDD::DislocationDynamicsModule | [virtual] |
toggleUpwindDirection() | LSMDD::DislocationDynamicsModule | [virtual] |
VISUALIZATION_FILE_FORMAT enum name | LSMDD::DislocationDynamicsModule | |
writeAllDislocationLinesToFile(const string &base_name, const VISUALIZATION_FILE_FORMAT file_type=ASCII) | LSMDD::DislocationDynamicsModule | [virtual] |
writeOneDislocationLineToAsciiFile(const string &base_name, const int line_handle, const bool overwrite_file=true) | LSMDD::DislocationDynamicsModule | [protected, virtual] |
writeOneDislocationLineToBinaryFile(const string &base_name, const int line_handle, const bool overwrite_file=true) | LSMDD::DislocationDynamicsModule | [protected, virtual] |
writeOneDislocationLineToFile(const int line_handle, const string &base_name, const VISUALIZATION_FILE_FORMAT file_type=ASCII, const bool overwrite_file=true, const bool allocate_scratch_data=true) | LSMDD::DislocationDynamicsModule | [virtual] |
~DislocationDynamicsModule() | LSMDD::DislocationDynamicsModule | [virtual] |